Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953910.1_cds_XP_016492889.1_83055
CDS Infomation

[gene=LOC107812346] [db_xref=GeneID:107812346] [protein=serine/threonine-protein kinase STN8, chloroplastic-like] [protein_id=XP_016492889.1] [location=complement(join(1436..1771,2783..3187,3453..3626,4513..5070))] [gbkey=CDS]
Sequence

ATGGCGTCTCTGCTTTCTCCTGCTACTGCAACAATTTGTTTCTCACCACTGAAACCCATT
TCGAAAAGCTATTATTTTTGGTCTTGTACCAACCATTGCAAAAGAAATAACACCATTACT
TGCAATTCTTTTGTTAATGACATTTCTGATAATTTAGACCATTCTTTATCTCAATTCCCA
ATTTTCCAATCTGGGTATGCCCAGTTTCAAAAGGTGACTGGGGAATTACCTGAAGAGCAG
AAGTTGGGCCTGTTAGTTTTTGCAGGGCTTTCTTGGATTTATTTAACTGCTAGACCAGGA
GTTTTAATTGGTGCAATTGATGCATATATTTTAGCACCTATTCAAGTGGGGTTGGATAGT
TTGAGTGGGAAAAGGAGTTTTGAGATGAGTGATTTTTTGGTTGGGGAAAGGTTGGGAGAG
GGTTCATTTGGGATTGTTTATTCTGGGGTTATTGTTCCCAAGAATGTAAATTTGGATGAA
ATTGTTAGGAAAAGAGGATCATCAGCAAAATCACTTATCACTGACTCAAGGTTCAAGGAT
AAGGTCATTCTTAAACAGGTAAAGATTGGTGTTCAAGGTGCTGCAGAATGTGGTGATTTT
GAAGAATGGTTCAATTATAGGCTATCAAGAGCGGCTCCCGAGACATGTGCAGAGTTTCTT
GGTAGCTTTGTTGCTGAAAAAACTAATTCACGATATACCAAGGGTGAGAAATGGCTTGTC
TGGAAATTTGAGGGAAATCGGGACCTAGCTGATTACCTGAAGGACCGCGACTTCCCCTTG
AACATGGAATCTATCATGTTTGGTCGTGTCTTAGAAGGATTGGAATCAATTCAACGGAAT
GCACTAATTATCAAACAAATCATGCGTCAGATTATTACTTCCCTTAAGAAAATCCATGAC
ACAGGTATAGTCCATAGAGATGTAAAGCCATCCAACTTAGTGGTCACAAAAAAGGGACAA
ATCAAGTTGATAGATTTTGGGGCAGCAACTGATCTTCGGATTGGAAAAAATTATGTGCCT
GACCGCGGGCTACTCGATCCTGATTATTGTCCACCTGAACTCTATGTAATGCCAGAAGAA
ACTCCAAAACCACCACCAGAGCCCGTTGCTGCACTTCTTTCCCCAGTTTTATGGCAGCTA
AACAGTCCCGACCTCTTTGACACATATTCTGCTGGAATAGTGCTTCTGCAAATGGCAGTA
CCGAACTTAAGGTCTACAGCAGGCTTAAAGAACTTCAATAGAGAACTACAGGTCGTTGGA
TATGACTTGAATAGATGGAGAGAAAAGACTAGGATGAGGCCTGATCTCAGTATTCTTGAT
CTCGACTCTGGTAGAGGGTGGGATTTGGCTACGAAACTTATTTCAGAGAGAGGTGGACGT
TTATCTGCTGCTGCAGCTCTTAGACATCCTTATTTCCTTCTAGGTGGTGACCAAGCTGCT
GCAGTTCTCTCAAAACTTAGCTTCACAAAATAG

Peptide Sequence

PEP ID

XP_016492889.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase STN8, chloroplastic-like [Nicotiana tabacum]
Sequence

MASLLSPATATICFSPLKPISKSYYFWSCTNHCKRNNTITCNSFVNDISDNLDHSLSQFP
IFQSGYAQFQKVTGELPEEQKLGLLVFAGLSWIYLTARPGVLIGAIDAYILAPIQVGLDS
LSGKRSFEMSDFLVGERLGEGSFGIVYSGVIVPKNVNLDEIVRKRGSSAKSLITDSRFKD
KVILKQVKIGVQGAAECGDFEEWFNYRLSRAAPETCAEFLGSFVAEKTNSRYTKGEKWLV
WKFEGNRDLADYLKDRDFPLNMESIMFGRVLEGLESIQRNALIIKQIMRQIITSLKKIHD
TGIVHRDVKPSNLVVTKKGQIKLIDFGAATDLRIGKNYVPDRGLLDPDYCPPELYVMPEE
TPKPPPEPVAALLSPVLWQLNSPDLFDTYSAGIVLLQMAVPNLRSTAGLKNFNRELQVVG
YDLNRWREKTRMRPDLSILDLDSGRGWDLATKLISERGGRLSAAAALRHPYFLLGGDQAA
AVLSKLSFTK

Transcript Sequence

Gene sequence data has not been registered.